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Plant Genomics 2019

Plant Genomics 2019

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Vols 1 and 2 contain 57 papers in the Special Issue of ‘Plant Genomics 2009’ and cover a wide range of topics, highlighting the significant progress that has been made in recent years in our understanding of the genetics and genomics of plants’ growth, development, and stress responses. These studies provide valuable insights into the potential applications of genomic tools and technologies for crop improvement and sustainable agriculture, as well as fundamental questions about the evolution and function of plant genes and genomes.

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Keywords

  • 2OGD family
  • ABA
  • ABC transporters
  • ABCDE model
  • abiotic stress
  • abiotic stress tolerance
  • Abscisic Acid
  • acetolactate synthase
  • acteoside biosynthesis
  • Agrobacterium
  • alien substitution line
  • alternative splicing
  • anthocyanin biosynthetic genes
  • Anthocyanins
  • antioxidant
  • Apple
  • aquaporin
  • aquaporins
  • Arabidopsis
  • Aristolochia
  • artificial microRNA
  • avocado
  • azafrin biosynthesis
  • B3 superfamily
  • Bioinformatics
  • biosynthesis pathway
  • biotic stress
  • Brachypodium
  • Brassica rapa
  • brassinosteroid-signaling kinase
  • BrBGLU10
  • bright yellow-2 suspension cells
  • calcium signaling
  • calcium-dependent protein kinases
  • Camellia sinensis
  • Capsicum chinense
  • carotenoid biosynthesis
  • cassava
  • cassava (Manihot esculenta)
  • catalpol biosynthesis
  • CDPK-related kinases
  • Centranthera grandiflora Benth
  • cereals
  • chalcone synthase
  • chalcones
  • chemical fungicide
  • ChIP-sequencing
  • chloroplast genome
  • chromatin accessibility
  • chromosome 2
  • Cis-elements
  • cis-regulatory motifs
  • citrulline
  • co-expression analysis
  • co-integration
  • cold response
  • common bean
  • comparative chromosome barcoding
  • Comparative genomics
  • compare analysis
  • Cotton
  • CRISPR/Cas9
  • Crop Improvement
  • CsWRKY7
  • cucurbitaceae
  • Cutin
  • Cytokinins
  • d60
  • Dasypyrum villosum
  • data integration
  • de novo assembly from short read sequencing
  • DEGs
  • differentially expressed genes
  • directional improvement
  • disease control
  • DNA Methylation
  • drought
  • drought stress
  • drought tolerance
  • duplication pattern
  • duplication/triplication
  • dysploidy
  • epigenetic inheritance
  • Eucalyptus grandis
  • Evolution
  • evolutionary analysis
  • evolutionary relationships
  • Expression
  • expression analysis
  • expression pattern
  • expression patterns
  • expression profile
  • expression profiling
  • Fabaceae
  • fatty acid synthesis
  • ferrochelatase
  • fine mapping
  • flavonolignans
  • flax
  • floral organ
  • floral speciation
  • flower organ identity
  • flowering
  • foxtail millet
  • Fruit
  • fruit development
  • full-length transcript sequencing
  • Functional analysis
  • Fusarium oxysproum
  • GASR
  • GDSL lipase
  • gene co-expression
  • gene dosage
  • gene duplications
  • Gene expression
  • gene families
  • gene family
  • gene recombination
  • Gene silencing
  • Genetic engineering
  • Genome
  • Genome editing
  • genome evolution
  • genome fractionation
  • genome organization
  • genome-wide
  • genome-wide analysis
  • Genome-Wide Association Study
  • Genome-wide association study (GWAS)
  • genome-wide identification
  • genomic selection
  • genotype-to-phenotype association
  • GISH
  • glutamine synthetase (GS)
  • GPAT6
  • grain yield
  • grapevine
  • GW2
  • habaneros
  • haplotype
  • heat shock protein
  • hormone biosynthetic and metabolism genes
  • hst1
  • hub genes
  • Humanities
  • identification of peroxidase genes
  • intron retention
  • invasive weed
  • karyopherin
  • karyotype structure and evolution
  • kernel hardness
  • Lagerstroemia indica
  • large grain gene
  • large grain-isogenic Koshihikari
  • leaf coloration
  • leaf variegation
  • LIM genes
  • linkage
  • linoleic acid
  • linseed flax
  • Lupinus
  • MADS-box
  • MADS-box genes
  • Maize
  • marker-assisted selection
  • mesocarp
  • Meta-analysis
  • metabolite profiling
  • metabolome
  • Methylation
  • microRNA
  • minor allele frequency
  • miRNA156
  • missing data
  • model grass genus
  • molecular cytogenetics
  • Molecular evolution
  • molecular marker
  • multiple organellar RNA editing factor
  • multiplex genome editing
  • mutation hotspots
  • Na+ accumulation
  • natural variation
  • NB-LRR
  • Neoscytalidium dimidiatum
  • network analysis
  • NGS
  • Nicotiana tabacum
  • nutritional quality
  • oak species identification
  • ODNs
  • ornamental value
  • ovule abortion
  • phenomics
  • Philosophy
  • phosphoenolpyruvate carboxylase (PEPC)
  • phylogenetic analysis
  • phylogenetic relationship
  • phylogeny
  • phytohormone signaling
  • Phytohormones
  • pigment
  • pineapple
  • Pittosporum tobira
  • Plant breeding
  • plant defense
  • plant genome
  • Plant hormone
  • plant hormones
  • plant–pathogen interaction
  • plastid genome
  • pollen development
  • polygalacturonase (PGs), pectin methylesterase (PMEs), collinearity analysis
  • polyploidy
  • pomegranate
  • Populus trichocarpa
  • prediction accuracy
  • protein phosphatase (PP2C)
  • Puroindoline
  • Puroindoline b-2 variants
  • qRT-PCR
  • quantitative trait loci (QTL)
  • quantitative trait nucleotides (QTNs)
  • Quercus
  • rapid generation advance
  • reddish purple Chinese cabbage
  • Régulation
  • Rehmannia glutinosa L.
  • repeat sequences
  • replant disease
  • Rhizoctonia solani
  • rhizosphere microbes
  • Rice
  • RNA Editing
  • RNA-Seq
  • RNA-sequencing
  • RNAi
  • ROS scavenging enzyme
  • royal poinciana
  • Salicaceae
  • Salinity
  • salt tolerant
  • seed
  • seed development
  • semidwarf gene
  • sequence diversity
  • sesame
  • Silybum marianum
  • silymarin
  • Single nucleotide polymorphism (SNP)
  • site-specific selection
  • SNP
  • Solanum tuberosum
  • stem canker
  • stilbenes
  • Stress
  • stress marker genes
  • Stress Tolerance
  • structural genomics
  • subcellular localization
  • subgroup IId
  • substrate specificity
  • syntenic relationships
  • synteny
  • systemic signal
  • TaCKX expression
  • TaCKX1
  • TALEN
  • tobacco rattle virus (TRV)
  • tomato
  • tomato fruit ripening
  • transcription factor
  • Transcription Factors
  • transcriptional regulatory mechanism
  • transcriptome
  • transgenic rice
  • transient expression
  • transposable elements
  • turnip
  • UAE
  • variant annotation
  • virus-induced gene silencing (VIGS)
  • Vitis vinifera
  • VQ genes family
  • VvGAST
  • watermelon
  • wheat
  • wheat genome
  • wheat spikes
  • whole-genome duplication
  • whole-genome sequencing
  • YABBY
  • ZFN
  • ZmTCP
  • β-glucosidase

Links

DOI: 10.3390/books978-3-0365-8091-3

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